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Acid Fast Bacilli (AFB) Smear Reflex to PCR and or Culture

Alias TB Smear, Mycobacteria, Acid-Fast Stain Reflex to PCR and or Culture
Laboratory Section Microbiology
Methodology Microscopy, PCR, and or Mycobacterial Culture & Antibiotic Susceptibility
Preferred Specimen Lower Respiratory Tract Specimen (Expectorated Sputum, Tracheal Aspirate, Bronchial Wash or Lavage)
Transport Container Sputucol* or any other similar collecting system for respiratory tract samples (sterile container with proper closure)
Alternative Specimen / Container Body fluids, i.e. pleural fluid, peritoneal fluid, pericardial fluid, synovial fluid
Minimum Volume 3 mL or 1 gram
Preparation & Collection Instructions Indicate the specimen source. Sputum or lower respiratory tract specimens: 3 collections preferred to increase the sensitivity of the test: 1st on the spot, 2nd on the next morning, and 3rd is followed by another spot sample on any days. Call Microbiology Section at local 637 for Sputucol* containers if needed. Other specimens: Submit in sterile properly closed container immediately.
Handling Instructions If delay is anticipated, refrigerate at 2 – 6° C as soon as possible. Do not freeze. Add sterile normal saline to bronchial brushings or tissue to prevent drying. Body Fluids: If large volumes of fluid are collected, take a 10 mL of aliquot of the well-mixed specimen. Wound Aspirate: Transfer aspirate to a sterile container. Remove needle and cap syringe. DO NOT send syringes with needles.
Transport Temperature Ambient (15 – 30 oC)
Specimen Stability Ambient: 2 hours
Refrigerated (2 – 8 oC): 5 days
Laboratory Receiving Time

In-patient and ER: Monday to Sunday, 24 Hours
Out-patient: Monday to Friday, 8AM to 4PM

Days & Time Performed Monday to Friday, 8 AM to 4 PM
Rejection Criteria

• Specimen older than stability limits
• Pooled specimen for sputum
• Quantity Not Sufficient (QNS)
• Unlabeled or Mislabeled specimen
• Preservatives used
• Swabs, urine, and stool specimens
• Frozen specimen
• Syringe or needle attached
• Leaking specimen or unsafe exposure condition

Turn Around Time

<Routine> Within 24 hours for direct smear screening microscopy
Note: The test performed at LBJLab is for direct smear screening only on the presence of acid-fast bacilli microscopically. Samples are referred further for additional testing at public health laboratory and off-island reference lab. Turn around time for positive report may take several weeks on culture and antibiotic susceptibility. Call Microbiology Section at local 637 for the follow up report.

Reference Range Negative or Not Detected
Limitations N/A

 

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